92876-2  Human coronavirus 229E+​HKU1+​NL63+​OC43 and Parainfluenza virus 1+​2+​3+​4 RNA panel - Lower respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 and Parainfluenza virus 1+​2+​3+​4 RNA panel - Lower respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 & Parainfluenza virus 1+​2+​3+​4 RNA panel: -: Pt: Respiratory.lower: -: Probe.amp.tar  

PANEL HIERARCHY  (view this panel in the LForms viewer)

  LOINC#   LOINC Name R/O/C  Cardinality  Ex. UCUM Units 
  92876-2   Human coronavirus 229E+​HKU1+​NL63+​OC43 and Parainfluenza virus 1+​2+​3+​4 RNA panel - Lower respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 and Parainfluenza virus 1+​2+​3+​4 RNA panel - Lower respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 & Parainfluenza virus 1+​2+​3+​4 RNA panel: -: Pt: Respiratory.lower: -: Probe.amp.tar    
       92883-8   Parainfluenza virus 1+​2+​3+​4 RNA [Presence] in Lower respiratory specimen by NAA with probe detectionParainfluenza virus 1+​2+​3+​4 RNA [Presence] in Lower respiratory specimen by NAA with probe detectionParainfluenza virus 1+​2+​3+​4 RNA: PrThr: Pt: Respiratory.lower: Ord: Probe.amp.tar    
       92878-8   Human coronavirus 229E+​HKU1+​NL63+​OC43 RNA [Presence] in Lower respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 RNA [Presence] in Lower respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 RNA: PrThr: Pt: Respiratory.lower: Ord: Probe.amp.tar    
 

NAME
  Fully Specified Name: 
Component   Property   Time   System   Scale   Method
Human coronavirus 229E+HKU1+NL63+OC43 & Parainfluenza virus 1+2+3+4 RNA panel  Pt  Respiratory.lower  Probe.amp.tar
  Long Common Name:  Human coronavirus 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel - Lower respiratory specimen by NAA with probe detection
  Short Name:  4 HCoVs + HPIV1-4 RNA Pnl LowResp NAA+Pr
  Display Name:  HCoV 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel NAA+probe (Lower resp)

BASIC ATTRIBUTES
  Class/Type: PANEL.MICRO/Lab
  Panel Type: Panel
  First Released in Version: 2.66
  Last Updated in Version: 2.66
  Order vs. Obs.: Order
  Status: Active

MEMBER OF THESE EQUIVALENCE GROUPS
  LG32771-4  Human coronavirus

PARTS

Part Type    Part No.  Part Name   
Component   LP344992-5  Human coronavirus 229E+HKU1+NL63+OC43 & Parainfluenza virus 1+2+3+4 RNA panel   [Human coronavirus 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel] 
Time   LP6960-1  Pt   [Point in time (spot)] 
System   LP201886-1  Respiratory.lower   [Lower respiratory specimen] 
Scale   LP7747-1 
Method   LP6464-4  Probe.amp.tar   [Nucleic acid amplification with probe detection] 
Fragments for synonyms   LP20740-4 
Fragments for synonyms   LP21059-8  Panel 
Fragments for synonyms   LP21265-1 
Fragments for synonyms   LP21267-7 
Fragments for synonyms   LP28602-8  Parainfluenza 
Fragments for synonyms   LP35082-4  Lower 

RELATED NAMES
  3 Self-Sustaining Sequence Replication II Parainfluenza type I
  3SR SR III PCR
  4 HCoVs + HPIV1-4 RNA Pnl LAT PI1
  Amplif LCR Pnl
  Amplification Ligase chain reaction Point in time
  Amplified Ligation-activated transcription Polymerase chain reaction
  Corona virus Low Probe amp
  DNA NUCLEIC ACID PROBE Lower Resp Probe with ampification
  DNA probe Microbiology Probe with target amplification
  HCoV NAA+probe QBR
  HCoV 229E NAAT Random
  HCoV 229E+HKU1+NL63+OC43 NASBA Ribonucleic acid
  HPIV Nucleic acid sequence based analysis SDA
  HPIV 1+2+3+4 Pan Strand Displacement Amplification
  HPIV 1+2+3+4 RNA PANEL.MICROBIOLOGY TMA
  HPIV1 Panl Transcription mediated amplification
  HPIV1+2+3 Para  
  Human respirovirus 1 Parainflu  
  i Parainfluenza type 1  

CHANGE HISTORY
  Change Type: ADD

INTERNAL FIELDS
  Detail Page Created On: 6/20/2019 8:57:39 AM
  Long Common Name: Human coronavirus 229E+HKU1+NL63+OC43 and Parainfluenza virus 1+2+3+4 RNA panel - Lower respiratory specimen by NAA with probe detection
  Shortname: 4 HCoVs + HPIV1-4 RNA Pnl LowResp NAA+Pr
  Fully Specified Name: Human coronavirus 229E+HKU1+NL63+OC43 & Parainfluenza virus 1+2+3+4 RNA panel: -: Pt: Respiratory.lower: -: Probe.amp.tar
     
  Component Word Count: 14
  ID: 100456
  # of Panel Elements: 3
  Status (Raw): ACTIVE



Selected information about each LOINC that is part of this panel



92883-8   Parainfluenza virus 1+​2+​3+​4 RNA [Presence] in Lower respiratory specimen by NAA with probe detectionParainfluenza virus 1+​2+​3+​4 RNA [Presence] in Lower respiratory specimen by NAA with probe detectionParainfluenza virus 1+​2+​3+​4 RNA: PrThr: Pt: Respiratory.lower: Ord: Probe.amp.tar  

NAME
  Fully Specified Name: 
Component   Property   Time   System   Scale   Method
Parainfluenza virus 1+2+3+4 RNA  PrThr  Pt  Respiratory.lower  Ord  Probe.amp.tar
  Long Common Name:  Parainfluenza virus 1+2+3+4 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
  Short Name:  HPIV 1+2+3+4 RNA Lower Resp Ql NAA+probe
  Display Name:  Parainfluenza virus 1+2+3+4 RNA NAA+probe Ql (Lower resp)

BASIC ATTRIBUTES
  Class/Type: MICRO/Lab
  First Released in Version: 2.66
  Last Updated in Version: 2.66
  Order vs. Obs.: Both
  Status: Active

EXAMPLE ANSWER LIST    (LL2021-5)  
 
Source: Gen-Probe
  SEQ#        Answer        Answer ID    
  1       Positive
http://snomed.info/sct ©: 10828004 Positive (qualifier value)    
  LA6576-8  
  2       Negative
http://snomed.info/sct ©: 260385009 Negative (qualifier value)    
  LA6577-6  
  3       Invalid       LA15841-2  

MEMBER OF THESE EQUIVALENCE GROUPS
  LG50887-5  Parainfluenza virus 1+2+3+4 RNA|PrThr|Sys:ANYResp

PARTS

Part Type    Part No.  Part Name   
Component   LP145690-6  Parainfluenza virus 1+2+3+4 
Component   LP266321-1  Parainfluenza virus 1+2+3+4 RNA 
     Suffix   LP32423-3  RNA 
Property   LP217195-9  PrThr   [Presence or Threshold] 
Time   LP6960-1  Pt   [Point in time (spot)] 
System   LP201886-1  Respiratory.lower   [Lower respiratory specimen] 
Scale   LP7751-3  Ord 
Method   LP6464-4  Probe.amp.tar   [Nucleic acid amplification with probe detection] 
Fragments for synonyms   LP20740-4 
Fragments for synonyms   LP21265-1 
Fragments for synonyms   LP21267-7 
Fragments for synonyms   LP28602-8  Parainfluenza 
Fragments for synonyms   LP35082-4  Lower 

LANGUAGE VARIANTS
  Chinese (CHINA)  (From: Regenstrief-generated full translation based on part translation provided by Lin Zhang, A LOINC volunteer from China)
 
  副流感病毒 1+​2+​3+​4 型 RNA:存在情况或阈值:时间点:呼吸道.下:序数型:探针法.基因扩增.靶向副流感病毒 1+​2+​3+​4 型 RNA:存在情况或阈值:时间点:呼吸道.下:序数型:探针法.基因扩增.靶向
  Italian (ITALY)  (From: Regenstrief-generated full translation based on part translation provided by Consiglio Nazionale delle Ricerche)
 
  Parainfluenza virus 1+​2+​3+​4 , RNA:PrThr:Pt:Sistema respiratorio.inferiore:Ord:Sonda.amp.tarParainfluenza virus 1+​2+​3+​4 , RNA:PrThr:Pt:Sistema respiratorio.inferiore:Ord:Sonda.amp.tar
  Spanish (SPAIN)  (From: Regenstrief-generated full translation based on part translation provided by the Clinical Laboratory Committee of SERVICIO EXTREMEÑO DE SALUD, with the support of BITAC MAP.)
 
  Parainfluenza virus 1+​2+​3+​4 RNA:PrThr:Punto temporal:Tracto respiratorio inferior:Ord:Sonda con amplificación dirigidaParainfluenza virus 1+​2+​3+​4 RNA:PrThr:Punto temporal:Tracto respiratorio inferior:Ord:Sonda con amplificación dirigida
  Turkish (TURKEY)  (From: Regenstrief-generated full translation based on part translation provided by LOINC Turkish Translation Group and the Turkish Ministry of Health)
 
  Parainfluenza virüsü 1+​2+​3+​4 RNA:MevcEşik:Zmlı:Respiratuvar.alt:Srl:Prob.amf.hdfParainfluenza virüsü 1+​2+​3+​4 RNA:MevcEşik:Zmlı:Respiratuvar.alt:Srl:Prob.amf.hdf

RELATED NAMES
  3 Self-Sustaining Sequence Replication Ligase chain reaction PR
  3SR SR Ligation-activated transcription Probe amp
  Amplif Low Probe with ampification
  Amplification Lower Resp Probe with target amplification
  Amplified Microbiology QBR
  DNA NUCLEIC ACID PROBE NAA+probe QL
  DNA probe NAAT Qual
  HPIV NASBA Qualitative
  HPIV 1+2+3+4 Nucleic acid sequence based analysis Random
  HPIV 1+2+3+4 RNA Ordinal Ribonucleic acid
  HPIV1 Para Screen
  HPIV1+2+3 Parainflu SDA
  Human respirovirus 1 Parainfluenza type 1 Strand Displacement Amplification
  i Parainfluenza type I TMA
  II PCR Transcription mediated amplification
  III PI1  
  LAT Point in time  
  LCR Polymerase chain reaction  

CHANGE HISTORY
  Change Type: ADD

INTERNAL FIELDS
  Detail Page Created On: 6/20/2019 8:57:39 AM
  Long Common Name: Parainfluenza virus 1+2+3+4 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
  Shortname: HPIV 1+2+3+4 RNA Lower Resp Ql NAA+probe
  Fully Specified Name: Parainfluenza virus 1+2+3+4 RNA: PrThr: Pt: Respiratory.lower: Ord: Probe.amp.tar
     
  Component Word Count: 7
  ID: 100463
  Status (Raw): ACTIVE


92878-8   Human coronavirus 229E+​HKU1+​NL63+​OC43 RNA [Presence] in Lower respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 RNA [Presence] in Lower respiratory specimen by NAA with probe detectionHuman coronavirus 229E+​HKU1+​NL63+​OC43 RNA: PrThr: Pt: Respiratory.lower: Ord: Probe.amp.tar  

NAME
  Fully Specified Name: 
Component   Property   Time   System   Scale   Method
Human coronavirus 229E+HKU1+NL63+OC43 RNA  PrThr  Pt  Respiratory.lower  Ord  Probe.amp.tar
  Long Common Name:  Human coronavirus 229E+HKU1+NL63+OC43 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
  Short Name:  4 HCoVs RNA Lower resp Ql NAA+probe
  Display Name:  HCoV 229E+HKU1+NL63+OC43 RNA NAA+probe Ql (Lower resp)

PART DEFINITION/DESCRIPTION(S)
  Part: Human coronavirus 229E+HKU1+NL63+OC43 RNA
  Coronaviruses are positive-sense, single-stranded RNA viruses. The envelope of the virus has glycoprotein spikes that give it a crown-like appearance. There are six strains of coronavirus within two subgroups that infect humans. The strains of human coronaviruses that commonly infect people worldwide include 229E and NL63 in the Alpha subgroup and OC43 and HKU1 in the Beta subgroup. These viruses most often cause common cold symptoms, but can also lead to pneumonia. Severe acute respiratory syndrome coronavirus (SARS-CoV) and the Middle East Respiratory Syndrome Coronavirus (MERS-CoV) are less common but cause more severe illness.[https://www.cdc.gov/coronavirus/types.html][https://academic.oup.com/cid/article/37/7/929/422314]
 
 

BASIC ATTRIBUTES
  Class/Type: MICRO/Lab
  First Released in Version: 2.66
  Last Updated in Version: 2.66
  Order vs. Obs.: Both
  Status: Active

EXAMPLE ANSWER LIST    (LL2021-5)  
 
Source: Gen-Probe
  SEQ#        Answer        Answer ID    
  1       Positive
http://snomed.info/sct ©: 10828004 Positive (qualifier value)    
  LA6576-8  
  2       Negative
http://snomed.info/sct ©: 260385009 Negative (qualifier value)    
  LA6577-6  
  3       Invalid       LA15841-2  

MEMBER OF THESE EQUIVALENCE GROUPS
  LG50873-5  Human coronavirus 229E+HKU1+NL63+OC43 RNA|PrThr|Sys:ANYResp
  LG32771-4  Human coronavirus

PARTS

Part Type    Part No.  Part Name   
Component   LP263694-4  Human coronavirus 229E+HKU1+NL63+OC43 RNA 
Component   LP263700-9  Human coronavirus 229E+HKU1+NL63+OC43 
     Suffix   LP32423-3  RNA 
Property   LP217195-9  PrThr   [Presence or Threshold] 
Time   LP6960-1  Pt   [Point in time (spot)] 
System   LP201886-1  Respiratory.lower   [Lower respiratory specimen] 
Scale   LP7751-3  Ord 
Method   LP6464-4  Probe.amp.tar   [Nucleic acid amplification with probe detection] 
Fragments for synonyms   LP35082-4  Lower 

LANGUAGE VARIANTS
  Chinese (CHINA)  (From: Regenstrief-generated full translation based on part translation provided by Lin Zhang, A LOINC volunteer from China)
 
  人类冠状病毒 229E+​HKU1+​NL63+​OC43 RNA:存在情况或阈值:时间点:呼吸道.下:序数型:探针法.基因扩增.靶向人类冠状病毒 229E+​HKU1+​NL63+​OC43 RNA:存在情况或阈值:时间点:呼吸道.下:序数型:探针法.基因扩增.靶向
  Italian (ITALY)  (From: Regenstrief-generated full translation based on part translation provided by Consiglio Nazionale delle Ricerche)
 
  Coronavirus umano 229E+​HKU1+​NL63+​OC43 , RNA:PrThr:Pt:Sistema respiratorio.inferiore:Ord:Sonda.amp.tarCoronavirus umano 229E+​HKU1+​NL63+​OC43 , RNA:PrThr:Pt:Sistema respiratorio.inferiore:Ord:Sonda.amp.tar
  Spanish (SPAIN)  (From: Regenstrief-generated full translation based on part translation provided by the Clinical Laboratory Committee of SERVICIO EXTREMEÑO DE SALUD, with the support of BITAC MAP.)
 
  Coronavirus Humano 229E+​HKU1+​NL63+​OC43 RNA:PrThr:Punto temporal:Tracto respiratorio inferior:Ord:Sonda con amplificación dirigidaCoronavirus Humano 229E+​HKU1+​NL63+​OC43 RNA:PrThr:Punto temporal:Tracto respiratorio inferior:Ord:Sonda con amplificación dirigida

RELATED NAMES
  3 Self-Sustaining Sequence Replication Ligation-activated transcription Probe with target amplification
  3SR SR Low QBR
  Amplif Lower Resp QL
  Amplification Microbiology Qual
  Amplified NAA+probe Qualitative
  Corona virus NAAT Random
  CoV 229E+HKU1+NL63+OC43 NASBA Ribonucleic acid
  DNA NUCLEIC ACID PROBE Nucleic acid sequence based analysis Screen
  DNA probe Ordinal SDA
  HCoV PCR Strand Displacement Amplification
  HCoV 229E Point in time TMA
  HCoV 229E+HKU1+NL63+OC43 Polymerase chain reaction Transcription mediated amplification
  LAT PR  
  LCR Probe amp  
  Ligase chain reaction Probe with ampification  

CHANGE HISTORY
  Change Type: ADD

INTERNAL FIELDS
  Detail Page Created On: 6/20/2019 8:57:40 AM
  Long Common Name: Human coronavirus 229E+HKU1+NL63+OC43 RNA [Presence] in Lower respiratory specimen by NAA with probe detection
  Shortname: 4 HCoVs RNA Lower resp Ql NAA+probe
  Fully Specified Name: Human coronavirus 229E+HKU1+NL63+OC43 RNA: PrThr: Pt: Respiratory.lower: Ord: Probe.amp.tar
     
  Component Word Count: 7
  ID: 100458
  Status (Raw): ACTIVE

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  Code System: http://snomed.info/sct
  This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.

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