92888-7  Varicella zoster virus DNA [Presence] in Skin by NAA with probe detectionVaricella zoster virus DNA [Presence] in Skin by NAA with probe detectionVaricella zoster virus DNA: PrThr: Pt: Skin: Ord: Probe.amp.tar  

NAME
  Fully Specified Name: 
Component   Property   Time   System   Scale   Method
Varicella zoster virus DNA  PrThr  Pt  Skin  Ord  Probe.amp.tar
  Long Common Name:  Varicella zoster virus DNA [Presence] in Skin by NAA with probe detection
  Short Name:  VZV DNA Skin Ql NAA+probe
  Display Name:  VZV DNA NAA+probe Ql (Skin)

PART DEFINITION/DESCRIPTION(S)
  Part: Varicella zoster virus
  Varicella zoster virus (VZV) is a double-stranded alphaherpesvirus that causes seasonal outbreaks of chickenpox and shingles in non-immunized populations. VZV is highly infectious and is transmitted by contact with the ruptured fluid filled blisters and respiratory secretions of infected individuals. Immunity post infection is usually lifelong though the latent virus inhabits the sensory nerve ganglia where it can reactivate causing shingles when immunity declines with aging.[http://jvi.asm.org/content/88/24/13936.full] In the over fifty strains of VZV that have been sequenced it has been found that a single nucleotide polymorphism occurs about every 100 bases. The patterns of polymorphisms in VZV correlate with different geographical regions of infection and is the basis for the classification of viral clades.[https://grose.lab.uiowa.edu/vzv-genomes-and-evolution] Breuer proposed the nomenclature for the VZV clades as 1-5 with the suspected clades VI and VII to be confirmed later. The geographical regions associated with the seven clades are as follows:
Clades 1 and 3—represent the dominant clades of the circulating VZV in Europe and the Americas
Clades 4 and 5—found in Africa
Clade VI found in France, Italy
Clade VII exclusively isolated in the US
Clade 2—Asia from Korea, Japan, China not found in India, Nepal and Bangladesh where clades 4 and 5 were dominant
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5054591/
 
 

BASIC ATTRIBUTES
  Class/Type: MICRO/Lab
  First Released in Version: 2.66
  Last Updated in Version: 2.66
  Order vs. Obs.: Both
  Status: Active

EXAMPLE ANSWER LIST    (LL2021-5)  
 
Source: Gen-Probe
  SEQ#        Answer        Answer ID    
  1       Positive
http://snomed.info/sct ©: 10828004 Positive (qualifier value)    
  LA6576-8  
  2       Negative
http://snomed.info/sct ©: 260385009 Negative (qualifier value)    
  LA6577-6  
  3       Invalid       LA15841-2  

MEMBER OF THESE PANELS     
  This section provides information about panels that contain this LOINC code.
  LOINC   Long Common Name  
  92861-4 Herpes simplex virus 1 and 2 and Varicella zoster virus DNA panel - Skin by NAA with probe detection
  

MEMBER OF THESE EQUIVALENCE GROUPS
  LG32750-8  Varicella zoster virus

PARTS

Part Type    Part No.  Part Name   
Component   LP14853-3  Varicella zoster virus 
Component   LP40115-5  Varicella zoster virus DNA 
     Suffix   LP32416-7  DNA 
Property   LP217195-9  PrThr   [Presence or Threshold] 
Time   LP6960-1  Pt   [Point in time (spot)] 
System   LP36760-4  Skin 
Scale   LP7751-3  Ord 
Method   LP6464-4  Probe.amp.tar   [Nucleic acid amplification with probe detection] 
Fragments for synonyms   LP76007-1  Skin 

LANGUAGE VARIANTS
  Chinese (CHINA)  (From: Regenstrief-generated full translation based on part translation provided by Lin Zhang, A LOINC volunteer from China)
 
  水痘带状疱疹病毒 DNA:存在情况或阈值:时间点:皮肤:序数型:探针法.基因扩增.靶向水痘带状疱疹病毒 DNA:存在情况或阈值:时间点:皮肤:序数型:探针法.基因扩增.靶向
  Dutch (NETHERLANDS)  (From: Regenstrief-generated full translation based on part translation provided by NVKC, Dutch Society for Clinical Chemistry and Laboratory Medicine, The Netherlands)
 
  varicella-zostervirus DNA:aanwezigheid:moment:huid:ordinaal:moleculaire techniek (PCR)varicella-zostervirus DNA:aanwezigheid:moment:huid:ordinaal:moleculaire techniek (PCR)
  French (BELGIUM)  (From: Regenstrief-generated full translation based on part translation provided by Jean M. Prevost, MD, Biopathology)
 
  Virus varicelle-zona ADN:PrThr:Temps ponctuel:Peau:Ordinal:Sonde avec amplification de la cibleVirus varicelle-zona ADN:PrThr:Temps ponctuel:Peau:Ordinal:Sonde avec amplification de la cible
  French (CANADA)  (From: Regenstrief-generated full translation based on part translation provided by Canada Health Infoway Inc.)
 
  Virus varicelle-zona , ADN:Présence-Seuil:Temps ponctuel:Peau:Ordinal:Sonde avec amplification de la cibleVirus varicelle-zona , ADN:Présence-Seuil:Temps ponctuel:Peau:Ordinal:Sonde avec amplification de la cible
  Italian (ITALY)  (From: Regenstrief-generated full translation based on part translation provided by Consiglio Nazionale delle Ricerche)
 
  Varicella zoster, virus , DNA:PrThr:Pt:Pelle:Ord:Sonda.amp.tarVaricella zoster, virus , DNA:PrThr:Pt:Pelle:Ord:Sonda.amp.tar
  Russian (RUSSIAN FEDERATION)  (From: Regenstrief-generated full translation based on part translation provided by Yaroslavl State Medical Academy)
 
  Varicella zoster вирус ДНК:PrThr:ТчкВрм:Кожа:Пор:Проба.усил.мишVaricella zoster вирус ДНК:PrThr:ТчкВрм:Кожа:Пор:Проба.усил.миш
  Spanish (SPAIN)  (From: Regenstrief-generated full translation based on part translation provided by the Clinical Laboratory Committee of SERVICIO EXTREMEÑO DE SALUD, with the support of BITAC MAP.)
 
  Virus Varicella zoster ADN:PrThr:Punto temporal:Piel:Ord:Sonda con amplificación dirigidaVirus Varicella zoster ADN:PrThr:Punto temporal:Piel:Ord:Sonda con amplificación dirigida
  Turkish (TURKEY)  (From: Regenstrief-generated full translation based on part translation provided by LOINC Turkish Translation Group and the Turkish Ministry of Health)
 
  Varicella zoster virüsü DNA:MevcEşik:Zmlı:Deri:Srl:Prob.amf.hdfVaricella zoster virüsü DNA:MevcEşik:Zmlı:Deri:Srl:Prob.amf.hdf

RELATED NAMES
  3 Self-Sustaining Sequence Replication LAT QBR
  3SR SR LCR QL
  Amplif Ligase chain reaction Qual
  Amplification Ligation-activated transcription Qualitative
  Amplified Microbiology Random
  Chicken pox NAA+probe Screen
  Chicken pox virus NAAT SDA
  Chickenpox NASBA Shingles
  Deoxyribonucleic acid Nucleic acid sequence based analysis Skn
  Dermatologic Ordinal Strand Displacement Amplification
  DNA NUCLEIC ACID PROBE PCR TMA
  DNA probe Point in time Transcription mediated amplification
  Epidermis Polymerase chain reaction VZ
  Herpes zoster PR VZV
  HHV-3 Probe amp Zoster
  Human herpesvirus 3 Probe with ampification  
  Integument Probe with target amplification  

CHANGE HISTORY
  Change Type: ADD

INTERNAL FIELDS
  Detail Page Created On: 6/26/2019 11:53:37 AM
  Long Common Name: Varicella zoster virus DNA [Presence] in Skin by NAA with probe detection
  Shortname: VZV DNA Skin Ql NAA+probe
  Fully Specified Name: Varicella zoster virus DNA: PrThr: Pt: Skin: Ord: Probe.amp.tar
     
  Component Word Count: 4
  ID: 100468
  Status (Raw): ACTIVE

3rd PARTY COPYRIGHT
  Code System: http://snomed.info/sct
  This material includes SNOMED Clinical Terms® (SNOMED CT®) which is used by permission of the International Health Terminology Standards Development Organisation (IHTSDO) under license. All rights reserved. SNOMED CT® was originally created by The College of American Pathologists. "SNOMED" and "SNOMED CT" are registered trademarks of the IHTSDO.

This material includes content from the US Edition to SNOMED CT, which is developed and maintained by the U.S. National Library of Medicine and is available to authorized UMLS Metathesaurus Licensees from the UTS Downloads site at https://uts.nlm.nih.gov.

Use of SNOMED CT content is subject to the terms and conditions set forth in the SNOMED CT Affiliate License Agreement. It is the responsibility of those implementing this product to ensure they are appropriately licensed and for more information on the license, including how to register as an Affiliate Licensee, please refer to http://www.snomed.org/snomed-ct/get-snomed-ct or info@snomed.org. This may incur a fee in SNOMED International non-Member countries.